UMLSいじってみる

bio IT

去年の前半までしかないなぁ、とか書いたら、最新のは別のところに置いた、と共有Wikiに書かれてました。発信した甲斐があったってもんでしょうか。
中身については、http://www.nlm.nih.gov/research/umls/online_learning/index.htmが役に立ちそう。
とりあえず、MRCONSO.RRFっちゅうファイルに用語などがまとめられているようだ。日本語も入っているぞ。

C0002395|ENG|P|L0002395|PF|S0012854|N|A0022349||M0000842|D000544|MSH|EN|D000544|Alzheimer's Disease|0|N|1792|
C0002395|ENG|P|L0002395|PF|S0012854|N|A10759976||C38778||NCI|KEGGPT|C38778|Alzheimer's Disease|0|N|1792|
C0002395|ENG|P|L0002395|PF|S0012854|N|A15661077|||T22|MEDLINEPLUS|PT|T22|Alzheimer's Disease|0|N|1792|
C0002395|ENG|P|L0002395|PF|S0012854|N|A7568669||C2866||NCI|PT|C2866|Alzheimer's Disease|0|N|1792|
C0002395|ENG|P|L0002395|PF|S0012854|Y|A0022350||||MTH|PN|NOCODE|Alzheimer's Disease|0|N|1792|
C0002395|ENG|P|L0002395|VC|S0352606|N|A12979872|||331.0|ICD9CM|AB|331.0|ALZHEIMER'S DISEASE|0|Y||
C0002395|ENG|P|L0002395|VC|S0352606|Y|A0386002||||COSTAR|PT|045|ALZHEIMER'S DISEASE|0|N|1536|
C0002395|ENG|P|L0002395|VC|S0355124|N|A0389303||||AOD|DE|0000006191|Alzheimer's disease|0|N|1536|
...
C0002395|ENG|P|L0002395|VO|S0352605|N|A11929545|||516000.0005|OMIM|PTAV|516000.0005|ALZHEIMER DISEASE|0|N|1536|
C0002395|ENG|P|L0002395|VO|S0352605|Y|A12007889|||104300|OMIM|PT|104300|ALZHEIMER DISEASE|0|N|1536|
C0002395|ENG|P|L0002395|VO|S0469910|Y|A13373880|45047014|26929004||SNOMEDCT|IS|26929004|Alzheimer's disease, NOS|9|O|1536|
C0002395|ENG|P|L0002395|VO|S1740188|Y|A12012061|||MTHU004582|OMIM|PTCS|MTHU004582|Alzheimer disease|0|N|1536|
C0002395|ENG|P|L0002395|VW|S0033597|Y|A0049636||M0000842|D000544|MSH|PM|D000544|Disease, Alzheimer's|0|N|1536|
C0002395|ENG|S|L0011267|PF|S6366315|Y|A8419969||M0000842|D000544|MSH|EN|D000544|Primary Senile Degenerative Dementia|0|N|1792|
C0002395|ENG|S|L0011267|VW|S2096943|Y|A1956616||M0000842|D000544|MSH|EN|D000544|Dementia, Primary Senile Degenerative|0|N|1536|
C0002395|ENG|S|L0011268|PF|S0030956|Y|A0046311||M0000842|D000544|MSH|EP|D000544|Dementia, Senile|0|N|1792|

日本語も入っている

C0002395|JPN|S|L3443287|PF|S3970781|Y|A15665456||M0000842|D000544|MSHJPN|SY|D000544|アルツハイマー型老年痴呆|3|N||
C0002395|JPN|S|L3443288|PF|S3970782|N|A11483331|||10012271|MDRJPN|LT|10001896|アルツハイマー病|3|N||
C0002395|JPN|S|L3443288|PF|S3970782|Y|A15691659||M0000842|D000544|MSHJPN|SY|D000544|アルツハイマー病|3|N||
C0002395|JPN|S|L3461572|PF|S3989066|Y|A15717870||M0000842|D000544|MSHJPN|SY|D000544|一次痴呆|3|N||
C0002395|JPN|S|L3482193|PF|S4009687|Y|A15700370||M0000842|D000544|MSHJPN|SY|D000544|老年一次性変性痴呆|3|N||
C0002395|JPN|S|L6232179|PF|S7185454|Y|A12752555|||10012271|MDRJPN|LTJKN|10001896|ｱﾙﾂﾊｲﾏｰﾋﾞｮｳ|3|N||
C0002395|JPN|S|L6266583|PF|S7185448|Y|A12743247|||10012271|MDRJPN|LTJKN|10012292|ｱﾙﾂﾊｲﾏｰｶﾞﾀﾆﾝﾁｼｮｳNOS|3|N||
C0002395|JPN|S|L6284072|PF|S7142941|N|A11405972|||10012271|MDRJPN|LT|10012271|アルツハイマー型認知症|3|N||

でもって、MRSTY.RRFというファイルには、そいつのタイプは何か、というのが書いてあるようだ。

C0002388|T061|B1.3.1.3|Therapeutic or Preventive Procedure|AT17628781|256|
C0002390|T047|B2.2.1.2.1|Disease or Syndrome|AT08557858|1792|
C0002393|T061|B1.3.1.3|Therapeutic or Preventive Procedure|AT17628782|256|
C0002395|T047|B2.2.1.2.1|Disease or Syndrome|AT32712410|1792|
C0002401|T004|A1.1.2|Fungus|AT17736227|256|
C0002402|T116|A1.4.1.2.1.7|Amino Acid, Peptide, or Protein|AT17671361|256|
C0002402|T131|A1.4.1.1.5|Hazardous or Poisonous Substance|AT17621906|256|